Pathogen Recognition by the Long Pentraxin PTX3

Innate immunity represents the first line of defence against pathogens and plays key roles in activation and orientation of the adaptive immune response. The innate immune system comprises both a cellular and a humoral arm. Components of the humoral arm include soluble pattern recognition molecules (PRMs) that recognise pathogen-associated molecular patterns (PAMPs) and initiate the immune response in coordination with the cellular arm, therefore acting as functional ancestors of antibodies. The long pentraxin PTX3 is a prototypic soluble PRM that is produced at sites of infection and inflammation by both somatic and immune cells. Gene targeting of this evolutionarily conserved protein has revealed a nonredundant role in resistance to selected pathogens. Moreover, PTX3 exerts important functions at the cross-road between innate immunity, inflammation, and female fertility. Here, we review the studies on PTX3, with emphasis on pathogen recognition and cross-talk with other components of the innate immune system.


Introduction
The innate immune system is evolutionarily older than the adaptive immune system and constitutes the first line of defence against pathogens. Innate immunity plays key roles in activation and orientation of adaptive immunity that provides the immunological memory. Components of the innate immune system that are involved in pathogen recognition and initiation of the immune response are germlineencoded receptors known as pattern recognition molecules (PRMs). These receptors recognize microbes or microbial moieties collectively named pathogen-associated molecular patterns (PAMPs) [1]. Based on cellular localisation and function, PRMs are classified into two major groups: (i) cell-associated receptors, which are localised in different cellular compartments and include endocytic receptors, such as scavenger receptors [2], signalling receptors, such as toll-like receptors (TLR) [3], and nucleotide-binding oligomerization domain-(NOD-) like receptors (NLR) [4], and (ii) fluid-phase molecules or opsonins, which represent the functional ancestors of antibodies and are involved in pathogen opsonisation, complement activation, and self versus modified self-discrimination [5].
Fluid phase PRMs are essential effectors and modulators of the innate resistance in animals and humans, and form a heterogeneous group of molecules, including collectins, ficolins, and pentraxins [6,7]. Some soluble PRMs are stored in granules of neutrophils and rapidly released (i.e., within minutes) into the extracellular milieu upon neutrophil stimulation, others are de novo synthesised as early gene products in mononuclear phagocytes and dendritic cells (DCs); in both cases, these PRMs are locally produced at sites of immune insult. As opposed to this, certain epithelial tissues (i.e., liver) act as a remote and delayed source of systemic PRMs [5]. Despite their heterogeneity in terms of molecular structure and site/time of production, soluble PRMs share basic, evolutionarily conserved functions, including opsonisation, complement activation, agglutination, and self versus modified self-discrimination [5].
Pentraxins are pivotal components of the innate immune system. Conserved in evolution from arachnids to humans, they are acute-phase reactants with a characteristic multimeric structure. Based on the primary structure of the composing protomers, pentraxins are divided into two groups: short and long pentraxins [8]. C-reactive protein (CRP) and serum amyloid P component (SAP) are prototypic short pentraxins, whereas pentraxin 3 (PTX3) and other subsequently identified proteins represent the long pentraxin arm of the family [9].
Here, we review-past and present literature on this family of proteins with main focus on the long pentraxin 3 and its involvement in innate resistance to pathogens.

The Pentraxin Superfamily
Pentraxins are distinctively characterized by the presence in their carboxy-terminal region of a ∼200 amino acid domain containing a highly conserved motif of primary sequence known as pentraxin signature (HxCxS/TWxS, where x is any amino acid). In the 1930s, C-reactive protein (CRP) was the first purified PRM, which was named after its ability to bind in a calcium-dependent fashion the C-polysaccharide of Streptococcus pneumoniae [10,11]. Human SAP was subsequently identified as a closely related protein (i.e., with 51% sequence identity to human CRP) [12]. Orthologous proteins to human CRP and SAP have also been described in the hemolymph of the arthropod Limulus polyphemus, where they are involved in recognition and killing of pathogens [13][14][15]. Both short pentraxins are 25-kDa proteins with a common structural organization that comprises five or ten identical subunits arranged in a pentameric radial symmetry [12,16]. CRP and SAP are the main acute-phase reactants in human and mouse, respectively. CRP is barely detectable in the plasma of healthy human adults (≤3 mg/L), but its concentration increases by as much as 1000-fold in several pathological conditions, with a sharp rise within 6 hours of induction and a maximum at approximately 48 hours. As opposed to this, the concentration of human (but not murine) SAP is substantially invariant (30-50 mg/L), even during the early acute-phase response [17]. Human CRP and SAP are both produced by hepatocytes, where the proinflammatory cytokine IL-6 is a major inducer of CRP both on its own and in synergy with IL-1 [18].
PTX3 is the prototypic long pentraxin that was first identified in the early 1990s as a cytokine-inducible gene in endothelial cells and fibroblasts. Long pentraxins have an unrelated amino-terminal region coupled to a carboxyterminal pentraxin-like domain and differ from short pentraxins in gene organization, chromosomal localization, and cellular source, inducing stimuli and recognized ligands. Other members of the long pentraxin subfamily have been identified, including guinea pig apexin [19], neuronal pentraxin 1 (NPTX1 or NP1) [20], neuronal pentraxin 2 (NPTX2, also called Narp or NP2) [21], and the transmembrane protein neuronal pentraxin receptor (NPTXR) [22]. In an attempt to find new pentraxin domain-containing proteins, we have recently identified a new long pentraxin, which we named PTX4. Like other members of this family, the gene encoding PTX4 is well conserved from mammals to lower vertebrates. However, PTX4 has a unique pattern of mRNA expression, which is distinct from that of other long pentraxins [23].

The Short Pentraxins in Innate Immunity
Short pentraxins are important players in humoral innate immunity, where they have been described to recognise a number of diverse ligands, mostly in a calcium-dependent manner. As mentioned above, the first reported ligand of CRP is the C-polysaccharide of Streptococcus pneumoniae. This interaction is mediated by phosphorylcholine (PC), a major constituent of the C-type capsule polysaccharides [10,11]. CRP recognizes additional pathogens, including fungi, yeasts, and bacteria, thus promoting phagocytosis and resistance to infection [24]. According to this, CRP transgenic mice are resistant to infection with Streptococcus pneumoniae, displaying longer survival time and lower mortality rate than normal littermates [25]. SAP is a calcium-dependent lectin originally purified based on its binding to the agarose component 4,6-cyclin pyruvate acetal of β-D-galactose [26]. Like CRP, SAP binds a number of bacteria, such as Streptococcus pyogenes and Neisseria meningitidis [27,28]. Binding of SAP to influenza virus [29] and lipopolysaccharide (LPS) has also been reported [28,30]. In this regard, SAP has been described to prevent LPS-mediated complement activation and LPS toxicity [28,31]. It has been proposed that both short pentraxins, either in aggregated form or in complex with ligands, interact with the globular head modules of the complement component C1q [32]. However, the relationship between ligand binding and function of these proteins is still a matter of debate [33]. Interestingly, CRP has been shown to protect mice from infection with Salmonella typhimurium, a pathogen that is not recognized by this short pentraxin, thus indicating that in some cases CRP binding to pathogens is not necessary to mediate host protection [34]. Similar observations have been reported for SAP, which exhibits a host defence function against pathogens that it does not bind. In contrast, the interaction with SAP can enable bacteria to evade neutrophil phagocytosis and display enhanced virulence, therefore indicating a dual role of SAP in bacterial infections [28]. Furthermore, CRP-mediated activation of the classical complement pathway has no role in protecting mice against S. pneumoniae infection [35].
The short pentraxins participate in activation and regulation of the three complement pathways (i.e., classical, lectin, and alternative) (reviewed in [5,8]), by interacting with C1q (CRP and SAP) [32], ficolins (CRP) [36,37], and factor H (CRP) [38][39][40]. It has been suggested that complement activation by short pentraxins might favour removal of the apoptotic debris, with potential implications in preventing the onset of autoimmune diseases [41]. Specific and saturable binding to all three classes of Fcγ receptors (FcγRs) has been demonstrated for both CRP and SAP, where these interactions mediate phagocytosis of apoptotic cells and microorganisms [42][43][44]. In a recent study, a 3D structure of human SAP in complex with the extracellular domain of FcγRIIa has been generated based on X-ray crystallography that suggests short pentraxins and IgG to share the same binding site on FcγRs [45]. Consistent with these observations, CRP and SAP proved effective to inhibit immune-complex-mediated phagocytosis [45]. Therefore, pentraxins can activate both complement and FcγRs pathways, which resembles the functional properties of antibodies.

The Long Pentraxin PTX3
4.1. Gene Organization and Expression. The human PTX3 gene has been localized on chromosome 3 band q25 and is organized in three exons separated by two introns. The first two exons code for the leader peptide and the Nterminal domain of the protein, respectively, and the third exon encodes the pentraxin domain [46]. The murine gene presents the same structural organization and is located on chromosome 3 [47]. The proximal promoters of both human and murine PTX3 genes share numerous potential enhancerbinding elements, including Pu1, AP-1, NF-κB, SP1, and NF-IL-6 sites [47,48]. It has been shown that the NF-κB binding site is essential for the transcriptional response to proinflammatory cytokines (i.e., TNF-α and IL-1β), whereas AP-1 controls the basal transcription of PTX3 [47,48].
Resting T and B lymphocytes and natural killer cells do not express PTX3 mRNA [61]. PTX3 is constitutively stored in the specific granules of neutrophils (i.e., with 24.9 ± 3.8 ng of protein per 10 6 cells) and is released in response to TLR engagement by micro-organisms or TLR agonists [62,63]. Expression of the PTX3 mRNA is temporally confined to immature myeloid cells. PTX3 can partially localize in neutrophil extracellular traps (NETs) formed by extruded DNA and neutrophil-associated-PTX3 promotes the in vivo control of Aspergillus fumigatus infection [62]. Moreover, PTX3 has been found in neutrophils in biopsies of colon mucosa from patients with inflammatory bowel disease and in neutrophils infiltrating the atherosclerotic plaque [63,64].
Different signalling pathways can affect PTX3 production, depending on cell type and/or stimuli. PTX3 expression in a model of acute myocardial ischemia is controlled by the NF-κB pathway [68], while induction of the protein by TNF-α in lung epithelial cells does not require NF-κB, but rather involves the c-Jun N-terminal Kinase (JNK) pathway [54]. Moreover, production of PTX3 in endothelial cells that is induced by high-density lipoproteins (HDLs) requires the activation of the PI3K/Akt pathway through G-coupled lysosphingolipid receptors [69].
Expression of PTX3 is modulated by glucocorticoid hormones (GCs) in a cell-dependent manner. GCs alone have been shown to induce or, under inflammatory conditions, enhance and extend PTX3 production in nonhematopoietic cells (e.g., fibroblasts and endothelial cells). In contrast, GCs treatment inhibits PTX3 production in hematopoietic cells (e.g., dendritic cells and macrophages) [70]. In keeping with these observations, in vivo administration of GCs increases the blood levels of PTX3. Moreover, patients with Cushing's syndrome exhibit increased levels of circulating PTX3, and reduced titers of the protein have been found in subjects affected by iatrogenic hypocortisolism [70]. The divergent effects observed in hematopoietic and nonhematopoietic cells are likely due to the different mechanisms of action of the glucocorticoid receptor in the two cell types. In nonhematopoietic cells, GC receptor acts as a liganddependent transcription factor (i.e., through a dimerizationdependent mechanism) to induce PTX3 expression, whereas in hematopoietic cells the GC receptor represses the protein expression by interfering with the action of other signalling pathways, probably NF-κB and AP-1 (i.e., through a dimerization-independent way) [70].

Protein Structure.
Human PTX3 is a multimeric glycoprotein, whose composing subunits are made of 381 amino acids, including a 17-residue signal peptide [46]. PTX3 primary sequence is highly conserved among animal species. Like other members of the long-pentraxin family, PTX3 is composed of a unique N-terminal region coupled to a 203 amino acid C-terminal domain homologous to the short pentraxins CRP and SAP (Figure 1(a)) [71]. The N-terminal region (residues 18-178 of the preprotein) is unrelated to any known protein structure. Nevertheless, secondary structure predictions indicate that this part of the protein is likely to form four α-helices, three of which (amino acids 78-97, 109-135, and 144-170) are probably involved in the formation of coiled-coil structures [72]. As stated above, the C-terminal domain of PTX3 (residues 179-381 of the preprotein) is homologous to the short-pentraxins CRP and SAP, with up to 57% similarity [71,73]. Therefore, threedimensional models of this domain have been generated that are based on the crystallographic structures of CRP and SAP and show the pentraxin domain of PTX3 to adopt a β-jelly roll topology, similar to that found in legume lectins [55,74,75]. Interestingly, the amino acids residues that form the calcium-binding pocket in CRP and SAP are missing in the pentraxin domain of PTX3, which might explain some binding properties of this long pentraxin (e.g., PTX3 binds C1q in a calcium-independent manner) [75]. A single N-glycosylation site has been identified in the C-terminal domain of PTX3 at Asn220 [74] (Figure 1(a)). This site is fully occupied by complex-type oligosaccharides, mainly fucosylated and sialylated biantennary sugars with a minor fraction of tri-and tetra-antennary glycans. Most importantly, PTX3 glycosylation has been shown to affect the protein binding to a number of ligands, thus suggesting that changes in the glycosylation status might represent a strategy to tune the biological activity of this long pentraxin (see below).
In addition to the multidomain organization, the human PTX3 protein shows a complex quaternary structure with protomer subunits assembled into high order oligomers stabilized by disulfide bonds [71]. Mass spectrometry and site directed mutagenesis analyses of the recombinant human protein indicate that PTX3 is made of covalent octamers (i.e., with a molecules mass of 340 kDa), where cysteine residues at positions 47, 49, and 103 in the N-terminal region form three interchain disulfides holding four protein subunits in a tetrameric arrangement. Two tetramers are linked together to form an octamer by additional interchain bridges involving the C-terminal domain cysteines Cys317 and Cys318 [82] (Figure 1(b)). A low-resolution model of the intact PTX3 molecule has been generated based on data from Electron Microscopy (EM) and Small Angle X-ray Scattering (SAXS), that shows the eight subunits of the protein fold into an elongated structure with a large and a small domain interconnected by a stalk region [83] (Figure 1(c)). This oligomerization state and the asymmetric shape of the molecule make PTX3 unique amongst pentraxins. The only other pentraxin that forms an octamer is SAP from Limulus polyphemus, which, however, has been reported to fold into a doubly stacked octameric ring [13].
As anticipated above, the structural determinants of the PTX3 quaternary organization are mainly localised in the N-terminal domain, where this region mediates the association of protomers into tetramers via both covalent (i.e., disulfide bonds) and noncovalent (i.e., interchain coiled coils) interactions [83] (Figure 1(b)). Besides their structural role as building blocks of the PTX3 molecule, the N-terminal domain tetramers act as functional units in the recognition of inter-α-inhibitor (IαI) and Fibroblast Growth Factor 2 (FGF2), two main ligands of PTX3 in cumulus oophorus expansion and angiogenesis, respectively [76,77]. Therefore, the PTX3 quaternary structure plays a key role in dictating the protein binding properties and, ultimately, its biological functions. The structural complexity and modular nature of the PTX3 protein, as described above, probably provide a molecular basis to explain the rather broad spectrum of cellular and molecular targets that are recognized by this long pentraxin and the diversity of its biological roles ( Figure 2). Here, we have classified the most relevant ligands of PTX3 based on the functional implications of their interaction with this protein, with major emphasis on complement regulation and pathogen recognition.

4.3.
Interaction with Complement. The first described and best characterized ligand of PTX3 is the complement component C1q [71,79]. PTX3 binds to plastic immobilized C1q, likely interacting with charged residues localized in the apex of the C1q globular heads (gC1q) [32,79]. In the same experimental conditions, PTX3 fails to interact with other components of the complement system, such as C3 and C4 (B. Bottazzi and L. Deban, unpublished observations). Interaction of C1q with plastic-immobilized PTX3, an experimental condition that could mimic the surface of microbes, results in the activation of the classical complement cascade, measured as C3 and C4 deposition. On the other hand, the presence of PTX3 in solution resulted in a dose-dependent inhibition of C1q hemolytic activity, due to interference with C1q binding to antibody-sensitized erythrocytes. These results indicate that the binding of fluidphase PTX3 to C1q may inhibit complement activation by competitive blocking of relevant interaction sites [79]. These data indicate that PTX3 may exert a dual role and contrasting effects on complement activation: it supports clearance of material that is able to bind PTX3, such as microbes, while, on the other hand, it may protect against unwanted complement activation in the fluid phase. The interaction with C1q and subsequent activation of complement are also modulated by the extent of PTX3 glycosylation, as demonstrated by the observation that removal of sialic acid or complete deglycosylation of the protein significantly increases its binding to C1q [74]. Consistent with this, PTX3 desialylation increases complement activation, as assessed by C3 and C4 deposition [74]. In this regard, it is worth noting that the oligosaccharides attached to the naturally expressed PTX3 from TNFα-stimulated fibrosarcoma cells and LPSstimulated DCs have been reported to exhibit heterogeneity with regard to the relative content of terminal sialic acid and bi, tri, and tetra-antennary glycans [74]. These observations suggest that changes in the PTX3 glycosylation pattern might occur depending on the cell type and inflammatory context in which the protein is produced and might contribute to modulate its biological functions [74].
In 1999, Jarva showed that CRP can modulate the alternative pathway of complement activation through interaction with factor H, the main soluble regulator of the alternative pathway [38]. PTX3 has also been described to interact with factor H, thus enhancing factor H and iC3b deposition on apoptotic cells [81]. These observations suggest that the interaction of PTX3 with factor H modulates activation of the alternative pathway by promoting factor  H deposition on PTX3-coated surfaces and preventing exaggerated complement activation [81].
Moreover, Ma and colleagues demonstrated that PTX3 interacts with L-Ficolin [84], similarly to CRP [85]. Ficolin-2 could be affinity-isolated from human plasma on immobilized PTX3. Ficolin-2, but not Ficolin-1 or Ficolin-3, was shown to bind A. fumigates, and this binding was enhanced by PTX3 and vice versa. Consistent with this, PTX3 increases Ficolin-2-dependent complement deposition on the surface of A. fumigatus. Other components of the lectin pathway of complement interact with PTX3: for example, the mannose binding lectin (MBL) binds PTX3 and SAP probably via its collagen-like domain [86]. Formation of the MBL/PTX3 complex recruits C1q and enhances C4 and C3 deposition on and phagocytosis of Candida albicans [86]. Thus, components of the humoral innate immune system, which activate different complement pathways, cooperate and amplify microbial recognition and effector functions.
Together, these observations suggest a dual role for PTX3 in the regulation of complement-mediated immune responses. Interplay with key components of the three complement pathways (i.e., C1q, Ficolin-2, MBL, factor H) points to PTX3 as an important player of the complex network of interactions that control complement functions.

PTX3 in Pathogen Recognition and Inflammation.
PTX3 can interact with a number of different pathogens including selected fungi, virus, and bacteria. A specific binding has been observed to zymosan, Paracoccidioides brasiliensis, and conidia from Aspergillus fumigatus [87,88]. Additional interactions have been reported with some selected Gram-positive and Gram-negative bacteria, including Staphyloccocus aureus, Pseudomonas aeruginosa, Salmonella typhimurium, Streptococcus pneumoniae, and Neisseria meningitidis and with human and murine cytomegalovirus (CMV) and H3N2 influenza virus [87,[89][90][91] (Figure 2). Among the tested microbial moieties, PTX3 binds Outer membrane protein A from Klebsiella pneumoniae (KpOmpA), a major component of the outer membrane of Gram-negative bacteria highly conserved throughout the enterobacteriaceae family [92], whereas it does not bind LPS, lipoteichoic acid (LTA), enterotoxin A and B, exotoxin A, and N-Acetylmuramyl-L-Alanyl-D-Isoglutamine (MDP).
The recognition of a microbial component by PTX3 can amplify the inflammatory response, as reported for the interaction between PTX3 and the Outer membrane protein A of K. pneumoniae (KpOmpA). Several phagocyte PRMs cooperate when they sense whole organisms through different PAMPs. For instance, CD36 mediates binding and internalization of Gram-positive bacteria and cooperates with TLR2 and TLR6, which induce cytokine production [93]. Similarly, OmpA interacts with the scavenger receptor lectin-like oxidized low-density lipoprotein receptor-1 (LOX-1) and scavenger receptor expressed by endothelial cell-I (SREC-1), activates phagocytes through TLR2, and binds to PTX3, thus leading to amplification of the innate response to this microbial moiety (see below) [92,94]. This cooperation amongst simultaneously engaged PRMs leads to activation of diverse cellular signaling pathways as well as of the humoral arm of the innate immune system, which results in synergy and amplification of the innate responses to pathogens. In contrast to zymosan [88], PTX3 does not enhance the in vitro recognition of KpOmpA or the cell activation induced by KpOmpA. However, in vivo, PTX3 increases the local inflammation induced by KpOmpA, in terms of cell recruitment and proinflammatory cytokine production [92]. This effect is complement-dependent and is abrogated after treatment with complement inhibitors [94]. However, this amplification loop is not a general mechanism, since PTX3 does not modify the inflammatory response induced by LPS, a microbial moiety not recognized by PTX3 [94].
Genetically modified mice allowed investigating the in vivo relevance of microbes recognition by PTX3. Ptx3 −/− mice are highly susceptible to invasive pulmonary aspergillosis, showing higher mortality [87]. PTX3-deficient neutrophils or dendritic cells and alveolar macrophages from Ptx3 −/− mice exhibit defective recognition and killing of conidia and the treatment with recombinant PTX3 or neutrophil-associated PTX3 reverses this phenotype [62,87]. This susceptibility is associated with a low protective T helper 1 (Th1) antifungal response coupled with an inappropriate Th2 response. Treatment with recombinant PTX3 restores the protective Th1 response demonstrating that PTX3 can participate in the tuning of immune responses [87,90]. Moreover, in an experimental model of chronic granulomatous disease (p47 phox −/− mice), PTX3 limits the Th17 response and the pathogenic inflammation induced by A. fumigatus infection. In both p47 phox −/− and p47 phox +/+ mice, PTX3 reduces neutrophil counts and mononuclear cells recruitment to the lung parenchyma and bronchoalveolar lavage fluid. Furthermore, in p47 phox −/− mice infected by A. fumigatus, PTX3 modulates cytokine production and adaptive immunity through the enhancement of a Th1/Treg response associated with the restriction of a Th2/Th17 response [95].
PTX3-overexpressing macrophages exhibit increased phagocytosis of zymosan and P. brasiliensis than macrophages from wild-type mice [88]. Interestingly, in response to zymosan, ptx3-transgenic macrophages have an enhanced expression of dectin-1, the cellular receptor primarily involved in the interaction between macrophages and zymosan. Moreover, since zymosan induces PTX3 expression, dectin-1 upregulation promotes a positive feedback for this mechanism of phagocytosis [88].
Recent results indicate that PTX3 has therapeutic activity in chronic lung infections by P. aeruginosa. Chronic lung infections by P. aeruginosa strains are a major cause of morbidity and mortality in Cystic Fibrosis (CF) patients. C57BL/6 mice infected chronically with P. aeruginosa and treated with recombinant human PTX3 show an enhanced clearance of bacteria from the lungs, which is associated with reduced production of local proinflammatory cytokines, neutrophil recruitment in the airways and histopathological lesions (Moalli et al., unpublished results).
The role played by PTX3 in innate resistance to pathogens could also be exerted in an opsonisationindependent manner: in the case of K. pneumoniae infection, Soares and his collaborators could not demonstrate binding of PTX3 to K. pneumoniae; however, overexpression of PTX3 by transgenic mice during infection was associated with an enhanced ability to produce proinflammatory mediators, including NO and TNFα, and, as a consequence, with protection or faster lethality, depending on the dose of inocula [96].
Bozza et al. studied the role of PTX3 in viral infections and found that PTX3 binds both human and murine cytomegalovirus (MCMV), reducing viral entry and infectivity in DC in vitro [89]. Consistently, PTX3-deficient mice are more susceptible to MCMV infection than PTX3 wild-type mice and PTX3 protects susceptible BALB/c mice from MCMV primary infection and reactivation in vivo as well as Aspergillus superinfection. This occurs through the activation of interferon regulatory factor 3 (IRF3) in DC via TLR9/MyD88-independent viral recognition and the promotion of the IL-12/IFN-γ-dependent effector pathway [89].
Finally, human and murine PTX3 binds influenza virus (H3N2) through the interaction between the viral haemagglutinin glycoprotein and the sialic acid residue present on the glycosidic moiety of PTX3. PTX3 inhibits virusinduced haemagglutination and viral neuraminidase activity and neutralizes the virus infectivity. Consistently, ptx3 −/− mice are more susceptible than wild-type mice to influenza virus infection. Treatment with recombinant PTX3 reduces mortality and the viral load [91]. However, it has been recently reported that both seasonal and pandemic H1N1 influenza A viruses were resistant to the antiviral activity of PTX3 [97]. 8

Journal of Biomedicine and Biotechnology
We recently investigated the molecular mechanisms underlying the opsonic activity of PTX3 and demonstrated that PTX3 enhances the recognition and phagocytosis of conidia by neutrophils through a Fcγ receptor II (FcγRII)and complement-dependent mechanism [78]. Indeed, PTX3 modulates different effector pathways involved in innate resistance to A. fumigatus, including the classic, the alternative, and the lectin pathway of complement activation, as stated above [71,79,81,84] or through the promotion of phagocytosis by interacting with FcγRs, which have been proposed as pentraxin receptors [45]. Our findings demonstrated that phagocytosis of PTX3-opsonized conidia is significantly increased in the presence of complement. The complement component C3 in particular plays a key role in Aspergillus conidia phagocytosis and PTX3 amplifies the complement-dependent effects on phagocytosis (Figure 3). In contrast, in vitro and in vivo data suggest that PTX3 plays its role in facilitating conidia phagocytosis independently of the interaction with C1q. Indeed, recombinant PTX3 has a therapeutic effect in a model of aspergillosis also in C1q-deficient mice, rescuing their defective resistance to the infection [87]. Moreover, in the presence of PTX3-opsonized conidia, CD11b activation, internalization, recruitment to the phagocytic cup, and CD11b-dependent phagocytosis are increased. Previous studies have provided evidence that FcγRs-derived signals induce activation of CR3 (CD11b/CD18) [98]. Specifically, FcγRs stimulation in macrophages promotes CR3 clustering into high-avidity complexes in phagocytic cups by a mechanism involving release of integrins from their cytoskeletal constraints, thus enhancing their lateral diffusion. PTX3 loses its therapeutic activity against A. fumigatus in FcRγ-deficient mice, which lack signaling from any functional activating FcγRs. On the same line, CD11b recruitment in the phagocytic cup is defective in PTX3-and FcRγ-deficient PMN and is rescued by recombinant PTX3 in PTX3-deficient PMN but not in FcRγ-deficient PMN [78]. These results suggest that both endogenous, neutrophil-stored, and exogenous (e.g., in a therapeutic setting) PTX3 act via the same complement/CD11b/FcγRs-dependent pathway.
The relevance in humans of data obtained in animals on the role of PTX3 in infections has been demonstrated by Olesen and colleagues who recently analyzed the role of polymorphisms within the PTX3 gene in pulmonary tuberculosis (TBC) and showed that the frequency of specific PTX3 haplotypes is significantly different in TBC patients as compared to healthy individuals [99]. In addition, recent observations by Chiarini and colleagues have shown that polymorphisms in the PTX3 gene correlate with the risk of Pseudomonas aeruginosa infections in CF patients [100].
In conclusion, PTX3 is released by PMNs and produced by DCs, neighbouring macrophages, and other cell types upon TLR engagement or pathogen recognition, recognizes microbial moieties, opsonises fungi, binds selected Grampositive and Gram-negative bacteria, and viruses, and activates complement. Opsonisation results in facilitated pathogen recognition (increased phagocytosis and killing) and activation of innate immune cells (increased cytokine and nitric oxide production); moreover, opsonisation by PTX3 is likely involved in the activation of an appropriate adaptive immune response (DC maturation and polarization). Again, as discussed above, all these properties suggest that this long pentraxin behaves as a functional ancestor of antibodies.
Data obtained in different models in vivo demonstrated that PTX3 is involved in modulating inflammation in sterile conditions, for instance, in acute myocardial infarction and atherosclerosis [101]. We recently demonstrated that PTX3 selectively binds P-selectin via its N-linked glycosidic moiety inhibiting leukocyte rolling on endothelium. Moreover, exogenously administered PTX3 and endogenous PTX3 released from hematopoietic cells provide a negative feedback loop that prevents excessive P-selectin-dependent recruitment of neutrophils in a model of acute lung injury (ALI), pleurisy, and mesenteric inflammation [80]. Therefore, these data suggests that PTX3 produced by activated leukocytes might locally dampen neutrophil recruitment and regulate inflammation. In keeping with this, Liu and colleagues suggested that PTX3 plays a protective role in the pathogenesis of acute lung injury (ALI) and the lack of PTX3 may enhance neutrophil recruitment, cell death, and inflammatory responses in the LPS instillation-induced ALI [102].

Self versus Modified Self-Discrimination.
Apoptosis is the process of controlled cell death that physiologically occurs in embryogenesis, tissue turnover, and resolution of inflammation. Rapid and efficient clearance of apoptotic cells by phagocytes is necessary to avoid loss of cell integrity, activation of bystander cells, and tissue damage that are induced by the proinflammatory contents of dying cells [103]. PRMs can opsonise apoptotic cells and modulate their recognition by phagocytes.
Both PTX3 and the short pentraxins SAP and CRP have been involved in the clearance of apoptotic cells, however with opposing functional effects [103]. While CRP and SAP opsonise apoptotic cells and promote their clearance, the binding of PTX3 to dying cells results in inhibition of their elimination [104][105][106]. In fact, the interaction between PTX3 and C1q prevents the binding of C1q to apoptotic cells, thus causing a defective recognition of these cellular targets by phagocytes [107]. Moreover, PTX3 inhibits the crosspresentation of apoptotic cell-derived antigens of self-, viral, or tumoral origin to autoreactive CD8 + T cells [108]. It has been reported that opsonisation of apoptotic cells by factor H limits the complement-mediated lysis of these cells [109]. Through its binding to factor H, PTX3 promotes recruitment of this complement component to the surface of dying cells, therefore, playing a role also as a negative modulator of the alternative pathway of complement activation in injured tissues [81]. However, we have described that endogenous PTX3 translocates to the plasma membrane of late apoptotic neutrophils through a process that involves fusion of granules and apoptotic cell membrane. The translocated PTX3 accumulates in blebs of the plasma membrane, where it acts as an "eat-me" molecule in promoting rather than inhibiting the clearance of apoptotic neutrophils by phagocytes [110]. Therefore, membrane-associated PTX3 favours phagocytosis of late apoptotic neutrophils, as opposed to the soluble form of PTX3 that inhibits this process, as discussed above.
The apparent contradiction between the two opposing functional effects of PTX3 might be resolved if the context of the protein production is taken into account. In fact, on one hand, cell-bound PTX3 might serve to enhance the elimination of apoptotic cells before loss of their cellmembrane permeability and release of self-antigens and alarmins [110,111]. On the other, rapid production and secretion of PTX3 during inflammation might avoid capture of apoptotic cells in a proinflammatory setting that is likely to trigger an immune response against self-antigens [103]. Data obtained in vivo actually support the hypothesis that PTX3 plays a protective role in a murine model of systemic lupus erythematosus (Lech et al., unpublished results).

PTX3 Role in Tissue
Remodelling. In addition to the biological activities that PTX3 exerts as a PRM of the innate immune system, new functional roles have been described for this long pentraxin in processes of tissue remodelling, including extracellular matrix deposition, angiogenesis, and restenosis.
Mammalian ovulation is a highly regulated, inflammation-like process that involves extensive tissue remodelling [112]. Ptx3 −/− mice generated by homologous recombination display a severe deficiency in female fertility [113]. This has been attributed to defective assembly of the viscoelastic hyaluronan-(HA-) rich matrix that forms around the oocyte in the preovulatory follicle (namely, the cumulus oophorus complex, COC), where PTX3 is produced by cumulus cells and localizes within the matrix [114]. Beside PTX3, other molecules are required for effective incorporation of HA into the cumulus matrix, including the HA-binding proteins TSG-6 and the serum proteoglycan IαI [112,115,116]. The current literature supports the hypothesis that heavy chains (HCs) from IαI become covalently attached to HA (i.e., to form HC·HA complexes) through reactions involving TSG-6, which acts as both a cofactor and catalyst [117,118]. The resulting HC·HA complexes are believed to be crosslinked by PTX3, where the long pentraxin can establish multiple contacts to HCs, thus providing structural integrity to the cumulus matrix [77,82]. The finding that PTX3 is an essential component of the cumulus oophorus extracellular matrix raises the possibility that this protein might have a similar localization and structural function in other HA-enriched inflammatory tissues, such as in rheumatoid arthritis, where TSG-6 and IαI are also present [118]. This hypothesis is corroborated by the observation that TSG-6 and PTX3 colocalize in the inflammatory infiltrates and endothelial cells of inflamed tissues [63].
Angiogenesis is the generation of new blood vessels from the endothelium of existing vasculature. This process, that occurs under normal physiological conditions in growth and development, and is required for successful wound healing, is regulated by the balance between pro-and antiangiogenic factors [119]. FGF2 is a major angiogenic inducer that promotes cell proliferation, chemotaxis, and protease production in cultured endothelial cells (ECs) and neovascularisation in vivo during wound healing, inflammation, tumour growth, and atherosclerosis [120]. PTX3 recognizes FGF2 with high affinity and specificity, where both proteins are produced by elements of the vessel wall (i.e., ECs and smooth muscle cells, SMCs) during inflammation [121,122]. PTX3 binding to FGF2 results in inhibition of the FGF2dependent EC proliferation in vitro and angiogenesis in vivo [121]. PTX3 produced by ECs and inflammatory cells may, therefore, affect the autocrine and paracrine activity of FGF2 on endothelium, providing a mechanism for tuning the neovascularisation process.
FGF2 is long known to promote survival, proliferation, and migration of SMCs expressing tyrosine-kinase FGF receptors (FGFRs) both in vitro and in vitro [120]. SMCs activation is a key feature of restenosis, the process of blood vessel narrowing that frequently occurs after coronary angioplasty [123]. It has been reported that PTX3 prevents the binding of FGF2 to FGFRs in human coronary artery SMCs, thus inhibiting the endogenous FGF2-dependent SMCs proliferation and suppressing the mitogenic and chemotactic activity exerted by exogenous FGF2 on these cells [122]. These observations suggest that PTX3 may represent a potent inhibitor of the autocrine and paracrine stimulation exerted by FGF2 on SMCs and point to a novel therapeutic role of PTX3 in the treatment of restenosis after angioplasty [124,125].
PTX3 expression has been recently reported in different tumours, and increasing evidence suggests a potential clinical use of this pentraxin as a novel cancer biomarker [126][127][128][129][130]. However, the role of PTX3 in oncogenesis is still unclear and certainly requires further investigations.

Diagnostic and Prognostic Potential of PTX3 in Infectious
Disorders. CRP has been extensively used clinically for over 75 years as a nonspecific systemic marker of infection, inflammation, and tissue damage. Given the rapid production of PTX3 during inflammation, PTX3 is a candidate marker for inflammatory, infectious, and cardiovascular pathologies (reviewed in [8,101,131]). PTX3 behaves as an acute-phase protein since its blood levels, low in normal conditions (about 25 ng/mL in the mouse, <2 ng/mL in humans), increase rapidly (with a maximum at 6-8 h) and dramatically (200-800 ng/mL) during endotoxic shock, sepsis, and other inflammatory and infectious conditions.
Increased levels of PTX3 have been observed in diverse infectious disorders including sepsis and septic shock, meningococcal disease, tuberculosis, and dengue infection [132][133][134][135]. Pulmonary tuberculosis patients were reported to present higher levels of plasma PTX3 as compared to healthy controls. Moreover, at the end of treatment, cured patients showed reduction of PTX3 titers whereas the protein level increased further in patients with treatment failure [132]. High concentrations of PTX3 were also found in dengue virus patients, where the highest titers were observed within 7 days of onset of symptoms. Interestingly, PTX3 levels were strikingly higher than those of CRP levels, suggesting that PTX3 might be a better marker of infection than C-reactive protein in dengue [133]. High plasma concentrations of PTX3 were seen at admission in patients with meningococcal disease, where the protein proved to be an early indicator of shock in patients with severe disease, despite its levels did not correlate with severity of the pathology [134]. In patients with severe sepsis or septic shock, high levels of plasma PTX3 over the first five days from admission have been associated with disease severity, secondary organ failures, and mortality. Moreover, PTX3 levels were shown to better correlate with severity of the disease and organ dysfunctions than other measured mediators (i.e., TNFα, IL-6, and CRP) [135].
It has been reported that the concentration of circulating PTX3 increases during pregnancy, a condition that has been associated with inflammation. Higher maternal PTX3 levels have been observed in pregnancies complicated by preeclampsia, which represents the clinical manifestation of an endothelial dysfunction that is part of an excessive maternal inflammatory response to pregnancy [136,137]. PTX3 plasma and vaginal levels increase also during pregnancy complicated by spontaneous preterm delivery, in particular in cases of placenta vasculopathy [138]. Furthermore, recent studies have reported the presence of PTX3 in the amniotic fluid and elevated protein concentrations in intra-amniotic inflammation and infection [139,140]. In contrast, the increased titres of maternal plasma PTX3 observed during labor are not related to either intra-amniotic inflammation or infection [141].
Collectively, these studies demonstrate that measurement of PTX3 may help monitoring disease activity and efficacy of therapy and might have a prognostic value.

Concluding Remarks
Pentraxins are essential components of the humoral arm of innate immunity, as such, they participate in recognition of and response to pathogens and tissue damage, in coordination with the cellular arm. The short pentraxin CRP was the first identified soluble pattern recognition molecule. Yet, in spite of its widespread use as a diagnostic tool in the clinic, its in vivo function has not been unambiguously defined, mostly due to the diverging regulation of its expression in the evolution from mouse to man. In contrast, gene targeting of the prototypic, evolutionarily conserved, long pentraxin PTX3 has unequivocally defined the role of this molecule in innate immunity and inflammation. The recent literature has further clarified the structure, regulation, microbial recognition, and in vivo functions of PTX3. As a component of the humoral arm of innate immunity, PTX3 plays a similar role to that exerted by antibodies in adaptive immunity, including complement activation, opsonisation, and glycosylation-dependent regulation of inflammation. Pathogen sensing and elimination are major functional roles of PTX3, where this long pentraxin facilitates recognition of microbes and microbial moieties, and promotes activation of innate immune cells. Also, the available evidence suggests that PTX3 not only acts as a PRM, but also plays prominent roles at the cross-road between vascular biology, female fertility, and discrimination between self, nonself, and modified self. Furthermore, clinical observations point to PTX3 as an early marker of infection and inflammation that rapidly reflects the physiopathological state of tissues and vessel wall.