Transcriptomic Analysis Reveals the Protection of Astragaloside IV against Diabetic Nephropathy by Modulating Inflammation

Background Diabetic nephropathy (DN) is one of the leading causes of end-stage kidney disease. Recently, there is no specific drug available to block the kidney damage. Astragaloside IV (AS-IV) is a major active component of Astragalus membranaceus (Fisch) Bge and has been demonstrated to benefit the kidney functions. This study explores the potential pharmacological action of AS-IV in DN of rats. Methods Male Sprague-Dawley rats were fed with high-fat diet and injected with streptozotocin to induce diabetes. The diabetic rats were randomized and treated with vehicle or AS-IV (80 mg/kg) daily by gavage for 12 weeks as the DN or AS-IV group, respectively. The normal control rats were fed with normal chow and injected with vehicles (n = 8 per group). These rats were monitored for diabetes- and kidney function-related measures. The expression profiles of gene mRNA transcripts in the kidney tissues were analyzed by RNA-seq and quantitative RT-PCR. The levels of advanced glycation end products (AGEs), IL-1β, and IL-18 in the serum samples and kidney tissues were quantified by ELISA. The levels of collagen IV (COL-4) and fibronectin (FN) expression in kidney tissues were examined by immunohistochemistry and Western blot. Results In comparison with the DN group, AS-IV treatment significantly reduced blood glucose levels, food and water consumption, 24 h urine, renal index values, 24 h urine total proteins, blood urea nitrogen (BUN) levels, and creatinine clearance rates (CCR), accompanied by minimizing the DN-induced early kidney damages, fibrosis, and microstructural changes. Furthermore, AS-IV treatment significantly modulated the DN-altered gene transcription profiles in the kidney of rats, particularly for inflammation-related genes, including the nucleotide-binding oligomerization domain-like receptor signaling, which was validated by quantitative RT-PCR. AS-IV treatment significantly decreased the levels of serum and kidney AGEs, IL-1β, and IL-18 expression and fibrosis indexes in the kidney of rats. Conclusion AS-IV treatment ameliorated the severity of DN by inhibiting inflammation-related gene expression in the kidney of rats.


Introduction
Diabetic nephropathy (DN) is one of the most common and primary chronic complications of diabetes and is the most common cause of end-stage kidney disease [1,2]. The incidence of diabetes is increasing and estimated to be about 592 million people by 2035 in the world [3]. Additionally, DN is a high-risk factor for the development of cardiovascu-patients eventually progress into renal failure [9]. Hence, understanding the pathogenic process of DN and development of new therapeutic reagents will be of high significance.
This study employed a rat model of DN to explore the transcriptomic profiles in the kidney following AS-IV treatment. Our findings indicated that AS-IV treatment modulated inflammatory signal pathways, particularly for the nucleotide-binding oligomerization domain-(NOD-) like receptor (NLR) signaling in the kidney of DN rats.

Animals and a Rat Model of Early DN.
Male Sprague-Dawley (SD) rats (4 weeks old) were obtained from Laboratory Animal Center, Chongqing Medical University, Chongqing, China. They were housed in a specific pathogen-free facility with a 12-hour (h) cycle of light/dark at 22°C and allowed to access food and water ad libitum.
A rat model of early DN was established using high-fat diet (HFD, D12451, Research Diets, USA) and a small dose of streptozotocin (STZ) [29,30]. Briefly, the rats were randomized and fed with normal chow (NC, n = 8) or HFD for 4 weeks. The normal chow-fed and HFD-fed rats were injected intraperitoneally with vehicle 0.1 M sodium citrate (pH 4.5) and STZ (35 mg/kg, Beijing Solarbio Science & Technology, Beijing, China), respectively. Three days later, their blood glucose (BG) levels were monitored using ACCU-CHEK Performa (Roche Diabetes Care GmbH, Shanghai, China). Individual rats with two consecutive BG levels > 16:7 mM were diagnosed as having diabetes. Two weeks after STZ injection, the diabetic rats were randomized and administrated with vehicle CMC-Na+ or 80 mg/kg AS-IV by gavage daily for 12 weeks as the DN-model or AS-IV group (n = 8 per group). Their body weights were measured weekly, and their BG levels were tested biweekly. The experimental protocol was approved by the Animal Experiments Ethical Review Committee of Chongqing Medical University, Chongqing, China.

Biochemical Characteristics in Urine and Serum.
At the end of the experiment, the 24 h urine samples of rats in individual metabolic cages were collected for the detection of urine total proteins. The amounts of food and water consumed by individual rats were assessed. After measurement of urine volumes and centrifugation, the urine samples were stored at -80°C. Subsequently, the blood samples of individual rats were collected for preparation of serum samples and the rats were sacrificed.
The levels of 24 h urine proteins, 24 h urine creatinine (UCR), serum creatinine (SCR), and blood urea nitrogen (BUN) were assessed using Quick Start™ Bradford 1x Dye Reagent (Bio-Rad Laboratories, USA) and specific kits (Nanjing Jiancheng Bioengineering Institute, Nanjing, China), according to the manufacturer's instructions. The endogenous creatinine clearance rate (CCR) of individual rats was used to evaluate glomerular filtration rate. After being adjusted by body weights, the CCR of each animal was calculated by the formula of CCR ðmL/min/kgÞ = urinary creatinine ðμMÞ * urine volume ðmL/minÞ/ðserum creatinine ðμMÞ * weight ðkgÞÞ.

Kidney Histology.
Rat kidneys were collected immediately after being sacrificed. The cortex of the right kidneys from three rats in each group was dissected and stored in RNA store reagent (Tiangen Biotech, Beijing, China) at 4°C overnight and later stored in -80°C for RNA extraction and transcriptome sequencing. The remaining kidney tissues were fixed in 4% paraformaldehyde and paraffin-embedded. The tissue sections (4 μm) were stained with hematoxylin and eosin (HE), Masson trichrome, and Periodic Acid-Schiff (PAS) and examined under a light microscope. At least 5 random positive areas in each section were photoimaged (magnification ×400) and analyzed using ImageJ (National Institutes of Health, USA).

Electron
Microscopy. The microstructural and morphological features of renal cells, such as the foot process of podocytes in the glomeruli, were examined by transmission electron microscopy (TEM). The renal cortex tissues in each animal were fixed with 2.5% dialdehyde and embedded. The ultrathin tissue sections (70 nm) were stained with uranyl acetate and lead citrate and examined by TEM (JEM-1400PLUS, Japan).
2.6. Transcriptomics. The total RNA was extracted from each renal cortex tissue, and after qualification and quantification, their mRNAs were enriched by poly-T oligo-attached magnetic beads and fragmented using divalent cations in NEB-Next First Strand Synthesis Reaction Buffer (5X), followed by purification. Subsequently, the cDNA was synthesized using random hexamer primer and M-MuLV Reverse Transcriptase (RNase H -), DNA Polymerase I, and RNase H. Sequencing libraries were prepared using NEBNext® Ultra™ RNA Library Prep Kit for Illumina® (NEB, USA), according to the manufacturer's instruction, and the library was assessed using Agilent 2100 bioanalyzer. Finally, the library was sequenced on an Illumina® NovaSeq platform [31] and yielded 150 bp paired-end reads. The generated raw reads were evaluated by the CASAVA base, and after removing adapter or ploy-N and low-quality reads, the remaining high quality reads were evaluated for their Q30, GC content, and alignment efficiency.
To more accurately evaluate the effect of AS-IV on gene expression in the kidney of DN rats, the differentially expressed genes (DEGs) were selected based on the following criteria: compared with the normal group, the DEGs with upregulated expression in the DN group, but downregulated in the AS-IV group, and those downregulated in the DN group, but upregulated expression in the AS-IV group. The selected DEGs were analyzed by gene clustering, Gene Ontology (GO), and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment (http://www.genome.jp/kegg/). Meanwhile, the enriched genes in the NLR signal pathway with significant difference between the DN-model and AS-IV group were further enriched by Gene Set Enrichment Analysis (GSEA) tool (http://software.broadinstitute.org/gsea/index .jsp), including subtle expression changes [31]. Furthermore, the interesting genes included the intersection of DEGs and enrichment genes in the NLR signaling pathway.

Reverse Transcription and Quantitative Polymerase
Chain Reaction (RT-qPCR). Total RNA was extracted from the kidney tissues of individual rats using RNAIso Plus (Takara, Japan) and reversely transcribed into cDNA using the PrimeScript™ RT Reagent Kit with gDNA Eraser (Perfect Real Time) (Takara), according to the manufacturer's instructions. The relative levels of target gene mRNA transcripts to the control GAPDH were determined using UltraSYBR Mixture (Cwbiotech, Beijing, China) and the specific primers (Supplementary Table S1). PCR reactions were performed in duplicate at 95°C for 10 min and subjected to 39 cycles of 95°C for 10s, 60°C for 30s, and 72°C for 32 s. The data were analyzed by 2 -ΔΔCt .
2.8. ELISA. The fresh kidney tissues were homogenized in PBS and centrifuged. After quantification of total proteins, the kidney tissue samples were used for measurement of advanced glycation end products (AGEs) and cytokines. The levels of serum and kidney AGEs in individual animals were analyzed by ELISA using Rat AGEs ELISA Kit (CUSA-BIO, Wuhan, China), according to the manufacturer's instructions. The levels of IL-1β and IL-18 in the serum samples and kidney tissues were quantified by ELISA using the commercially available kits (Boster Biological Technology, Wuhan, China), according to the manufacturer's instructions. The experimental and control samples were simultaneously tested in triplicate.
2.9. Immunohistochemistry. The paraffin-embedded kidney tissue sections (3 μm) were deparaffinized, rehydrated, and subjected to antigen retrieval, followed by inactivation of endogenous peroxidase with 3% H 2 O 2 in methanol. After being blocked with 3% bovine serum albumin, the sections were incubated overnight with anti-COL4, anti-FN, or isotype control (Proteintech, Wuhan, China, 1 : 500 for all) and bound antibodies were detected by horseradish peroxidase-(HRP-) labeled secondary antibodies. The specific sig-nals were visualized with DAB reagent (Servicebio, China) and counterstained with hematoxylin. The sections were observed under a light microscope, and five high power images selected randomly from each section were evaluated. The stained signals were quantified for average integrated optical density of each visual positive field using Image-Pro Plus system (Media Cybernetics, Bethesda, MD, USA).
2.10. Western Blot. The impact of AS-IV on kidney fibrosis in DN rats was examined by Western blot assays. Briefly, renal tissues from individual rats were homogenized by RIPA buffer containing phosphatase and protease inhibitors and centrifuged. After quantifying the protein concentrations using BCA method, the tissue lysates were separated by SDS-PAGE on 8-10% gels and electrically transferred onto PVDF membrane. The membrane was sealed by 5% skimmed milk in TBST buffer and incubated overnight at 4°C with anti-COL4 (Abcam, UK, 1 : 1000), anti-FN (Proteintech, 1 : 1000), and GAPDH (Servicebio, China, 1 : 3000). The bound antibodies were detected with HRP-conjugated secondary antibodies and visualized using the enhanced chemiluminescent reagent. The data were quantitated by densitometry using ImageJ software.
2.11. Statistical Analysis. All data were analyzed for their distribution. The data with a normal distribution are expressed as mean ± standard deviation (SD) and analyzed by one-way ANOVA and post-LSD test or Dunnett's T3 test. The skewed data are presented as median with range or transformed to rank cases for normalization and statistically analyzed. All statistical analyses were performed using SPSS 21.0 program. Statistical significance was determined when a p value < 0.05. The graphs were generated using GraphPad Prism 5 (GraphPad Software, San Diego, CA, USA), Adobe Photoshop CS6 software (Adobe Systems, San Jose, CA, USA), and Adobe Illustrator CC2019 software (Adobe Systems).

AS-IV Treatment Ameliorates Clinical Symptoms in DN
Rats. To understand the pharmacological action of AS-IV, a rat model of early DN was established and the diabetic rats were randomized and treated with vehicle or AS-IV for 12 weeks. To establish early DN, the rats were fed with HFD and injected with STZ. Throughout the 12 weeks, hyperglycemia gradually caused kidney damages in rats. In our preliminary study, we collected 24-hour urine every two weeks and measured the amount of urine total proteins. We found that the levels of 24-hour urine proteins in DN rats were >30 mg/24 h at least 8-10 weeks post hyperglycemia. Accordingly, we chose the 12-week time point in this study. The longitudinal measurements indicated that in comparison with that in the normal control (NC) group, the DN group of rats displayed significantly reduced body weights regardless of AS-IV treatment (p < 0:05 for both) and there was no significant difference in the body weights between the DN and AS-IV groups (Figure 1(a)). AS-IV treatment did significantly mitigate the DN-increased blood glucose in rats 3 Oxidative Medicine and Cellular Longevity Week Week  Oxidative Medicine and Cellular Longevity at 12-week posttreatment (p < 0:05, Figure 1(a)) although the levels of blood glucose in the AS-IV group of rats remained significantly higher than that in the NC group (p < 0:05, Figure 1(a)). Further analyses displayed that while the DN rats had significantly more water and food consumption and 24 h urine, relative to those in the NC group, AS-IV treatment significantly mitigated the amounts of water and food consumed and reduced levels of 24 h urine in rats (p < 0:05 for all, Figure 1(b)). Laboratory examinations revealed that the renal index values, the levels of 24 h urine total proteins, 24 h urine creatinine, BUN, and CCR in the AS-IV group were significantly higher than those in the NC group, but lower than those in the DN group of rats (p < 0:05 for all, Figure 1(c)). However, there was no significant difference in the levels of serum creatinine among these groups of rats. Collectively, such data indicated that the experimental protocol induced the early stage of renal injury and AS-IV treatment significantly ameliorated clinical symptoms and improved the kidney function in DN rats.

AS-IV Treatment Significantly Reduces the DN-Related
Pathological Changes in the Kidney of Rats. Next, we measured the histopathological changes in the kidney of different groups of rats after HE, Masson, and PAS staining and TEM analysis. In comparison with that in the NC group, the DN group of rats displayed severe pathological changes in glomerular, tubular, and renal interstitial morphology, such as glomerular hypertrophy, the increased thicknesses of glomerular basement membrane (GBM) and tubular basement membrane (TBM), mesangial expansion with increased matrix, podocyte damage, tubular epithelial cell vacuolar and granular degeneration, glomerular capsule cavity stenosis, and renal interstitial fibrosis, which were obviously reduced in the AS-IV group (Figure 2(a)). Quantitative analyses [16,20,24] revealed that AS-IV treatment significantly mitigated the DN-increased areas of mesangial matrix in the glomeruli and reduced the glomerulosclerosis index, interstitial fibrosis scores, and the percentages of collagen volume in the glomeruli of DN rats although they remained significantly higher than those in the NC group (p < 0:05 for all, Figure 2(b)). Furthermore, TEM analysis exhibited that compared with the NC group, the kidney from the DN group of rats displayed obviously increased thicknesses of the GBM, mild mesangial expansion, and local foot process fusion, which were less in the AS-IV group of rats (Figure 2(a)). These further indicated that the experimental protocol induced early stage of DN in rats. Together, AS-IV treatment significantly reduced the pathological changes, glycogen, and mucosubstance accumulation as well as fibrosis in the kidneys of DN rats.

AS-IV Treatment
Modulates the Transcriptional Profiles in the Kidney of DN Rats. To understand the pharmacological action of AS-IV, we characterized the transcriptional profiles in the kidneys of different groups of rats. After extraction of total RNAs and enrichment of mRNAs, the mRNAs were reversely transcribed into cDNA to generate libraries, which were sequenced. Subsequently, the generated raw reads were evaluated by the CASAVA base and after removing adapter or ploy-N and low-quality reads, the remaining about 10.64 GB high-quality reads were evaluated for their Q30, GC content, and alignment efficiency. The sequenced reads had the alignment efficacies of 96.31%-96.9% (Supplementary Table 2). Analysis of DEGs indicated that in comparison with the DN group, 3796 genes were downregulated while 3452 genes were upregulated in the AS-IV group of rats ( Figure 3). GO enrichment analysis revealed that the 3796 downregulated DEGs were involved in the biological processes, such as regulation of cytokine production, inflammation, cell activation and proliferation, and T cell activation; cell components, like ribosomal subunit, lysosome, vacuolar part, and cytosolic part; and molecular functions, including translation factor activity, catalytic activity, MHC protein binding, cytokine binding, kinase regulator activity, and protein kinase regulator activity (Figure 4(a)). The KEGG pathway enrichment analyses indicated that these DEGs were mainly involved in immune and inflammatory responses, including the B cell receptor signaling, natural killer cell-mediated cytotoxicity, complement and coagulation cascades, and the NLR signaling (Figure 4(b)). Regulation of kidney metabolism was closely related to the cholesterol metabolism, metabolism of xenobiotics by cytochrome P450, arginine biosynthesis, nicotinate and nicotinamide metabolism, and others.
In contrast, the 3452 upregulated DEGs were involved in the biological process, such as organelle location, regulation of cytoskeleton organization, and vesicle location; cell components, like Golgi subcompartment, adherence junction, and ubiquitin ligase complex; and molecular functions, including ubiquitin-like protein transferase activity, GTPase binding, microtubule binding, and thiol-dependent ubiquitinspecific protease activity (Figure 4(c)). The KEGG pathway enrichment analyses indicated that these DEGs were closely related to the ubiquitin-mediated proteolysis, endoplasmic reticulum, autophagy, insulin signal pathway, and others in the kidneys of rats (Figure 4(d)).

AS-IV Treatment
Modulates the NLR Signaling in the Kidney of DN Rats. It is well known that the NLR signaling is the intracellular sensors of pathogen-associated molecular patterns (PAMPs) of the pattern recognition receptor (PRR) family. The NLR signaling can crosstalk with the TLR to activate NF-κB and MAPK, leading to proinflammatory cytokine production. Given that AS-IV treatment ameliorated DN, we analyzed the expression profile of the NLR signal pathway by GSEA. As shown in Figure 5(a), the clustering of genes from the intersection of DEGs and NLR signaling-related genes revealed that the expression of 46 genes was downregulated while 13 were upregulated in the AS-IV group compared with the DN group. As shown in Figure 5  Oxidative Medicine and Cellular Longevity and decreased TRX1 mRNA transcripts were detected in the DN group, which were significantly mitigated by AS-IV treatment in the kidney of DN rats (p < 0:05 for all, Figure 5(c)). Therefore, AS-IV treatment significantly mitigated the DNmodulated NLR signaling in the kidney of rats.

AS-IV Treatment Reduces AGEs and Inflammatory
Cytokines in DN Rats. AGEs are kinds of senescent macroprotein derivatives formed at an accelerated rate under diabetes. AGEs through their signal-transducing receptor evokes oxidative stress and inflammation, thereby contributing to the pathogenesis of DN [32][33][34]. Meanwhile, we measured the levels of serum and kidney AGEs in individual rats by ELISA. As shown in Figure 6(a), AS-IV decreased the levels of serum and kidney AGEs in the DN rats, relative to those in the untreated DN rats (p < 0:05). These results revealed that AS-IV decreased AGE responses in DN rats. IL-1β and IL-18 are the most important inflammatory cytokines in the downstream of the NLR signal pathway [35]. Their levels are very important for the function of kidney cells during the process of DN. Accordingly, we measured the levels of IL-1β and IL-18 in the serum samples and kidney tissues by ELISA. As shown in Figures 6(b) and 6(c), AS-IV decreased the levels of IL-1β and IL-18 in the serum samples and kidney tissues from DN rats, relative to those in the DN rats (p < 0:05 for all). These results revealed that AS-IV could relieve the expression of IL-1β and IL-18 in DN rats.

AS-IV Treatment Minimizes Fibrosis in the Kidney of DN
Rats. Renal fibrosis is a typical pathological change in the pathogenic process of DN [36]. Finally, we characterized the expression of COL4 and FN in the kidneys of different groups of rats. Immunohistochemistry displayed that in comparison with normal groups, the COL4 deposition increased mainly in the basement membrane in DN rats and the FN deposition increased mainly in the mesangial area and renal interstitium in DN rats. However, compared with that in the DN rats, AS-IV treatment decreased the COL4 and FN deposition in the basement membrane or interstitium or mesangial area in the kidney of DN rats (Figure 7(a)). Further Western blot analysis revealed that AS-IV reduced the relative levels of COL4 and FN expression in the kidney tissues from DN rats (p < 0:05 for all, Figure 7(b)). These results revealed that AS-IV decreased the expression and deposition of extracellular matrix, delaying the process of renal fibrosis in DN rats.

Discussion
In the book Yellow Emperor's Internal Classic, diabetes is described as "xiao-ke"-"a disease with symptoms of frequent drinking, diet, urination and weigh loss" and DN belongs to edema, urine turbidity, and kidney labor. DN is attributed to the poor control of thirst, which gradually injures the five organs (heart, liver, spleen, lung, and kidney), especially the kidney. Pathologically, DN is characterized by interlocking and accumulation of phlegm and blood stasis, its pathogenesis is Qi-deficiency, phlegm stagnation, and blood stasis. Among them, Qi deficiency is the most important pathogenesis. Astragalus membranaceus (Fisch) Bge is the most important Chinese medicine for Qi-tonifying and frequently prescribed for DN patients [11,12]. Astragalus membranaceus (Fisch) Bge has been made as tablets for convenient application. AS-IV is a main bioactive component in Astragalus membranaceus (Fisch) Bge [37]. AS-IV has potent antidiabetes, antioxidation, anti-inflammatory, antifibrosis, and nephroprotective activities during the process of DN [17].
Hyperglycemia can induce excessive AGE formation, oxidative stress, damaged mitochondria accumulation, and increased ROS production in mesangial cells and reduce podocyte adhesion [38][39][40][41]. In this study, we explored the pharmacological action of AS-IV in a rat model of DN and found that treatment with AS-IV for 12 weeks significantly reduced food and water consumption, blood glucose levels, and urine amounts in rats, consistent with improved clinical symptoms [40]. Furthermore, treatment with AS-IV significantly mitigated the DN-related kidney GBM and TBM thicknesses, podocyte injury, and collagen deposition, the hallmarks of DN-related early kidney damages [40,42]. As a result, AS-IV treatment significantly improved the kidney function by reducing BUN levels, 24 h urine creatinine, and proteinuria in early DN rats. Furthermore, we did not detect significantly higher SCR in the DN group of rats, inconsistent with previous observations [26]. However, we detected significantly higher CCR in the DN group, which was reduced in the AS-IV group. During the process of DN, several factors induce renal damages, which gradually display glomerular hyperfiltration, albuminuria, declined glomerular filtration rate (GFR) and, finally end-stage renal disease [6]. In the early stage of DN, glomerular hyperfiltration results in a higher GFR [6]. With the disease progression, increased proteinuria decreases the GFR [6]. The levels of kidney function and pathological changes suggest that our experimental protocol induced the early stage of DN in rats. These findings extended previous observations [26,43] and support the notion that AS-IV treatment ameliorates the progression of DN and improves the kidney function.
Previous studies have shown that oxidative stress and inflammation are crucial for the development of DN [44,45]. In this study, we characterized the mRNA transcription   We found that AS-IV treatment significantly altered the transcription of many genes that were involved in the biological processes, cellular components, and molecular functions, particularly for inflammatory responses. These indicated that inflammation contributed to the progression of DN in rats. The KEGG analyses revealed that AS-IV treatment altered various pathways, including immune and inflammation response and metabolic, ubiquitination, endoplasmic reticulum, and autophagy pathways, supporting the previous reports [16,46]. Such novel findings may provide new insights into the pharmacological action of AS-IV in regulating the pathogenesis of DN in rats. Hyperglycemia is usually accompanied by an accelerated rate of AGE formation. The serum AGE levels were significantly increased in diabetic patients [47,48]. Accumulation of AGEs in the kidney may contribute to the progressive alteration in renal architecture and loss of renal function via various mechanisms [49][50][51][52], contributing to basement membrane thickening and mesangial expansion, hallmarks of DN [53,54]. Our results demonstrated that AS-IV treatment significantly reduced the levels of serum and kidney AGEs and improved the pathological structure and function of kidney in DN rats, consistent with a previous report [55].
Oxidative stress is one of the factors to induce renal injury, contributing to the pathogenesis of DN [56]. Hyperglycemia can directly cause oxidative stress by promoting the production of ROS, and AGEs can cause renal damage through oxidative stress during the process of DN [57][58][59]. Studies have shown that excessive ROS can promote the production of cytokines and transcription factors, ultimately leading to the synthesis and deposition of extracellular matrix and promoting the progression of renal fibrosis and end-stage renal failure in the early and late stages of DN [60,61]. The thioredoxin (TRX) system plays an important

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Oxidative Medicine and Cellular Longevity role in defending against oxidative stress [62] and is closely related to the NLRP3 inflammasome signaling pathway [63]. The TRX system consists of NADPH, TRXR, TRX, and TXNIP. TXNIP, also known as VDUP1, is the only endogenous negative regulator of TRX. TXNIP can not only block the antioxidant function of TRX but also induce the NLRP3 activation [64]. Our experiment results indicated that AS-IV treatment significantly decreased the relative levels of TXNIP but upregulated TRX1 mRNA transcripts in the kidney of DN rats. These results indicated that AS-IV could protect the kidney by enhancing the TRX antioxidant system. Inflammatory cytokines are crucial for the development of DN [45]. The NLR signaling is closely related to the pathogenic infection and subsequent inflammation and immune responses [65]. The NLR family currently has 22 members, which is mainly divided into four subfamilies, based on the N-terminal domain. Among these members, NOD1 and NOD2 in the NLRC subfamily can activate the NF-κB and MAPK signal pathways [66]. Other important members consist mainly of intracellular receptors, such as the NLRP subfamily member, ASC, and procaspase-1. Functionally, the NLR signaling can activate procaspase-1, leading to the production of inflammatory factors, including IL-1β and IL-18 [67]. NOD2 is an important factor and widely expressed by various types of cells [68]. A recent study has shown that NOD2 is highly expressed in kidney tissues [69] and contributes to the pathogenesis of DN [70]. IL-1β and IL-18 are the most important inflammatory cytokines in the downstream of the NLR signaling [35]. Their levels in the kidney are very important for the function of kidney cells during the process of DN. In our study, we found that AS-IV treatment significantly decreased the relative levels of NOD-2, JUN, NOX2, PANX1, TXNIP, caspase1, IL-1β, and IL-18 but upregulated TRX1 mRNA transcripts in the kidney of DN rats. Furthermore, AS-IV treatment significantly decreased the levels of IL-1β and IL-18 in serum samples and kidney tissues of DN rats. It is well known that c-JUN is a key factor of the AP-1 early response transcription factor in the MAPK signaling [71] and is associated with the development of diabetes and its microvascular 13 Oxidative Medicine and Cellular Longevity complications [72,73]. NOX is critical for the production of reactive oxygen species (ROS), leading to oxidative stress that contributes to DN development [50,51] [52,53]. Furthermore, high glucose can induce NOX2 expression, leading to oxidative stress in renal tubular epithelial and glomerular mesangial cells [74,75]. TXNIP acts as an endogenous TRX inhibitor that reduces TRX protein activity and expression [76]. Aberrant oxidative stress and high levels of ROS can activate TXNIP by releasing TXNIP from the TXNIP/TRX complex, which subsequently leads to the NLRP3 activation [64,77,78]. PANX1 is a member of the innexin family, and functionally, it regulates the gap junctions [79,80]. PANX1 can stimulate the ROS production and inflammasome activation, leading to caspase1 and IL-1β activation [81,82]. Our data suggest that AS-IV may ameliorate hyperglycemia and inhibit the NOD2-related NF-κB signaling, which crosstalks with the MAPK signaling, attenuating inflammation in DN rats. Simultaneously, AS-IV may suppress NOX2 expression, together with inhibition of PANX1 expression, to reduce ROS production and ROS-related TXNIP-promoted NLRP3 activation by enhancing TRX expression, inhibiting caspase1 activation, and IL-1β and IL-18 production in the kidney of DN rats [52,54]. Excessive AGE formation, oxidative stress and inflammatory responses can aggravate the progression of renal fibrosis and promote the deposition of extracellular matrix in the kidney of DN rats [36,83]. COL4 and FN are the main components of extracellular matrix [84]. Our experiment results revealed that AS-IV treatment significantly reduced the expression and deposition of extracellular matrix components in the kidney, delaying the process of renal fibrosis in DN rats. Hence, our novel findings may provide new insights into the pathogenesis of DN and the pharmacological action of AS-IV in inhibiting the progression of DN in rats. Conceivably, the hyperglycemia-related oxidative stress and inflammation to activate the NLR signaling may be new therapeutic targets for intervention of renal fibrosis in DN.

Conclusion
In summary, our data indicated that AS-IV treatment ameliorated clinical and pathological changes and improved the kidney function in DN rats. Transcriptomic analyses revealed that AS-IV treatment significantly mitigated the transcription of DN-related oxidative stress and inflammation-related NLR signal events in the kidney of rats. The decreased levels of AGEs, inflammation cytokines, and fibrosis further revealed that AS-IV treatment attenuated the NLR signaling and delayed the process of renal fibrosis in DN rats. Therefore, our findings may reveal new therapeutic targets for intervention of DN and provide new insights into the pharmacological action of AS-IV in inhibiting the progression of DN in rats.

Data Availability
The raw data used to support the findings of this study are available from the first author and corresponding author upon request. The raw data mainly included transcriptome analysis, physiological and biochemical markers, histopathological picture, and gene verification.

Ethical Approval
This study was approved by the Animal Experiments Ethical Review Committee of the Chongqing Medical University, Chongqing, China.